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What is an Epitope? Epitope, also known as antigenic determinant, is a part of an antigen that is recognized by an antibody and/or by a T-cell receptor It is important to note that the same host organism can have different epitopes recognized by different molecules. In addition, an epitope may have a different meaning depending on whether it is viewed from the perspective of the immune system or from the perspective of the chemical structure of the antigen. For example, an epitope may refer to the part of an antigen that is specifically bound by an antibody, or it could refer to the chemical structure of the antigen itself. Epitope is an essential term when it comes to immunology, because this is the part of the antigen that is recognized and targeted by the immune system. When the immune system recognizes an epitope, it produces an antibody which binds to that particular part of the antigen. This binding action triggers a cascade of events that ultimately lead to the destruction of the antigen by the immune system. In addition, epitopes play an important role in the development of vaccines. By targeting the epitopes of a particular pathogen, scientists can design a vaccine that will successfully elicit an immune response against that pathogen. The Five Best Examples of Epitopes 1. Linear Epitopes – Linear epitopes are composed of amino acids that are located in a continuous and linear fashion on the surface of an antigen. These are the most common type of epitopes and are recognized by both B-cells and T-cells. Examples of linear epitopes include the influenza virus' hemagglutinin protein, HIV's gp120 glycoprotein, and the hepatitis C virus' E1 and E2 envelope proteins. 2. Conformational Epitopes – Conformational epitopes are composed of amino acids in a specific three-dimensional structure. They are distinct from linear epitopes and must maintain their shape in order to be recognized by the immune system. Examples of conformational epitopes include the influenza virus' neuraminidase protein, the herpes simplex virus' gD glycoprotein, and the dengue virus' envelope proteins. 3. HLA-Restricted Epitopes – HLA-restricted epitopes are composed of a specific type of amino acid that is recognized and bound by the human leukocyte antigen (HLA) molecules. These molecules are found on the surface of the B-cells and T-cells and are responsible for the recognition of an antigen. Examples of HLA-restricted epitopes include the HIV gp120 glycoprotein, the hepatitis B virus’ surface and core antigens, and the HPV L1 protein. 4. Superantigens – Superantigens are a type of antigen that are capable of triggering a massive immune response. They are composed of a single polypeptide that contains multiple epitopes. Examples of superantigens include the streptococcal pyrogenic exotoxins, the staphylococcal enterotoxins, and the toxic shock syndrome toxin. 5. Multiepitopic Antigens – Multiepitopic antigens are composed of multiple epitopes that are separated by a distance. These epitopes can be either linear or conformational in nature. Examples of multiepitopic antigens include the influenza virus hemagglutinin and neuraminidase proteins, and the diphtheria toxin.